BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037B08LP1|AL430349
(552 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 838 0.0
>3x_Contig1781
Length = 20717
Score = 838 bits (413), Expect = 0.0
Identities = 516/551 (93%), Gaps = 11/551 (1%)
Strand = Plus / Plus
Query: 1 attcttgatccacamatccactctgtg-ccagcctcctaacgctctacagcgtacgcttt 59
|||||||||| ||| |||||||||||| |||||||||||||||| ||||| |||||||
Sbjct: 10780 attcttgatcaacaaatccactctgtggccagcctcctaacgct-tacagg--acgcttt 10836
Query: 60 cgcctcatsgttggaaacgtaattaasagtcgmtatatsggattcstttaccatggctat 119
||| |||| |||||||| |||||| ||||| ||||| |||||| ||||||||||||||
Sbjct: 10837 cgcatcat-gttggaaag--aattaagagtcgatatatgggattcgtttaccatggctat 10893
Query: 120 ctagmatwmtacgtcacagacatgcgagcayaaagtcccatgctgtttmagawacacaaa 179
|||| || ||||||||||||||| ||| | ||||||||||||||||| ||| ||| |||
Sbjct: 10894 ctagaataatacgtcacagacatg-gag-ataaagtcccatgctgtttaagaaacagaaa 10951
Query: 180 gamtatgtatgtctacamatatgtvatgttgtaaastggtgatgagatgagatgggatgc 239
|| ||||||||| |||| |||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 10952 gaatatgtatgtgtacaaatatgtaatgttgtaaagtggtgatgagatgagatgggatgc 11011
Query: 240 aattctgctacggacctttttaaagtgaaaaatttttgaaaaatttttgtatgggcgatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11012 aattctgctacggacctttttaaagtgaaaaatttttgaaaaatttttgtatgggcgatg 11071
Query: 300 agatgagctttgagataaatacacgaag-tggttkcatgccctaagggggtatgccagtg 358
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 11072 agatgagctttgagataaatacacgaagttggtttcatgccctaagggggtatgccagtg 11131
Query: 359 gtggtggtggtggtagtggcctacacgccactaccaccaacttgattt-cccatacctca 417
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 11132 gtggtggtggtggtagtggcctacacgccactaccaccaacttgatttccccatacctca 11191
Query: 418 acgtaaatcacgtgcataccaacgtacactgactatcccatacatgtcttcaartcttta 477
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 11192 acgtaaatcacgtgcataccaacgtacactgactatcccatacatgtcttcaagtcttta 11251
Query: 478 tcggawctcagttccctcctcatcgagcttcattcagtttgtagaatgactaatagatgg 537
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11252 tcggaactcagttccctcctcatcgagcttcattcagtttgtagaatgactaatagatgg 11311
Query: 538 tgggttgtccc 548
|||||||||||
Sbjct: 11312 tgggttgtccc 11322
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3667
Number of Sequences: 1807
Number of extensions: 3667
Number of successful extensions: 442
Number of sequences better than 1.0e-20: 1
length of query: 552
length of database: 10,358,551
effective HSP length: 16
effective length of query: 536
effective length of database: 10,329,639
effective search space: 5536686504
effective search space used: 5536686504
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)